Resolving genetic relationships in manna group of lichens from genus Aspicilia

As in many lichen-forming fungi, species of Aspicilia genus are widely distributed all over the world, but no reports exist about their phylogenetic relations based on molecular biological methods. In the current study the phylogenetic relations of some Aspicilia species mainly manna group of lichens were investigated. The ITS rDNA sequence information of 12 samples from six species were generated. The samples examined were collected from different provinces of Anatolia and all the sequences were aligned with the other allied groups; Pertusaria sp., Thamnolia sp., Dibaeis sp., Diploschistes sp., Ochrolechia sp. and Lecanora sp. sequence data obtained from GenBank. The phylogenetic tree obtained by minimum evolution analysis displayed two major branches. One of the branches with its six members (Aspicilia contorta subsp. contorta, A. contorta subsp. hoffmanniana, Aspicilia hispida, Aspicilia fruticulosa, Aspicilia desertorum Aspicilia calcarea) composed solely of Aspicilia samples from Anatolia. Three of the manna groups of lichens were placed in this branch of the tree. The other related taxa from Ostropomycetidae and Lecanoromycetidae took place in the other branch of the tree with Aspicilia samples from Anatolia. Results displayed that manna group of lichens, although do not represent taxonomical unit tend to form a group especially apperent by the Neigbour Joining analysis with Anatolian samples. Also the sequence information from Anatolian samples displayed that Aspicilia genus is phylogenetically closer to the orders and families from Ostropomycetidae subclass rather than Lecanoromycetidae which support the placement of Hymeneliaceae within Ostropomycetidae. © 2007 Academic Journals.

Dergi Adı African Journal of Biotechnology
Dergi Cilt Bilgisi 6
Dergi Sayısı 9
Sayfalar 1154 - 1160
Yayın Yılı 2007
Eser Adı
[dc.title]
Resolving genetic relationships in manna group of lichens from genus Aspicilia
Yazar
[dc.contributor.author]
Aras S.
Yazar
[dc.contributor.author]
Cansaran D.
Yazar
[dc.contributor.author]
Türk A.Ö.
Yazar
[dc.contributor.author]
Kandemir I.
Yazar
[dc.contributor.author]
Candan M.
Yayın Yılı
[dc.date.issued]
2007
Yayın Türü
[dc.type]
article
Özet
[dc.description.abstract]
As in many lichen-forming fungi, species of Aspicilia genus are widely distributed all over the world, but no reports exist about their phylogenetic relations based on molecular biological methods. In the current study the phylogenetic relations of some Aspicilia species mainly manna group of lichens were investigated. The ITS rDNA sequence information of 12 samples from six species were generated. The samples examined were collected from different provinces of Anatolia and all the sequences were aligned with the other allied groups; Pertusaria sp., Thamnolia sp., Dibaeis sp., Diploschistes sp., Ochrolechia sp. and Lecanora sp. sequence data obtained from GenBank. The phylogenetic tree obtained by minimum evolution analysis displayed two major branches. One of the branches with its six members (Aspicilia contorta subsp. contorta, A. contorta subsp. hoffmanniana, Aspicilia hispida, Aspicilia fruticulosa, Aspicilia desertorum Aspicilia calcarea) composed solely of Aspicilia samples from Anatolia. Three of the manna groups of lichens were placed in this branch of the tree. The other related taxa from Ostropomycetidae and Lecanoromycetidae took place in the other branch of the tree with Aspicilia samples from Anatolia. Results displayed that manna group of lichens, although do not represent taxonomical unit tend to form a group especially apperent by the Neigbour Joining analysis with Anatolian samples. Also the sequence information from Anatolian samples displayed that Aspicilia genus is phylogenetically closer to the orders and families from Ostropomycetidae subclass rather than Lecanoromycetidae which support the placement of Hymeneliaceae within Ostropomycetidae. © 2007 Academic Journals.
Kayıt Giriş Tarihi
[dc.date.accessioned]
2019-12-23
Açık Erişim Tarihi
[dc.date.available]
2019-12-23
Yayın Dili
[dc.language.iso]
eng
Konu Başlıkları
[dc.subject]
Anatolia
Konu Başlıkları
[dc.subject]
Aspicilia
Konu Başlıkları
[dc.subject]
ITS
Konu Başlıkları
[dc.subject]
Phylogenetic relations
Haklar
[dc.rights]
info:eu-repo/semantics/closedAccess
ISSN
[dc.identifier.issn]
1684-5315
İlk Sayfa Sayısı
[dc.identifier.startpage]
1154
Son Sayfa Sayısı
[dc.identifier.endpage]
1160
Dergi Adı
[dc.relation.journal]
African Journal of Biotechnology
Dergi Sayısı
[dc.identifier.issue]
9
Dergi Cilt Bilgisi
[dc.identifier.volume]
6
Tek Biçim Adres
[dc.identifier.uri]
https://hdl.handle.net/20.500.12628/7400
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Görüntülenme
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09.12.2022 tarihinden bu yana
İndirme
1
09.12.2022 tarihinden bu yana
Son Erişim Tarihi
12 Aralık 2023 21:30
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Aspicilia samples lichens contorta Anatolia phylogenetic Ostropomycetidae displayed sequence species obtained branches analysis branch Lecanoromycetidae groups relations information Anatolian related placed Academic solely Neigbour phylogenetically Journals composed calcarea) closer desertorum fruticulosa hispida hoffmanniana Joining represent
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